Expression Profiling

Expression Profiling

Analyse gene expression responses

Rely on our long-term experience: mRNA-Seq for gene expression analysis, detection of splicing events and fusion genes.

Gain one of the most comprehensive views of all expressed transcripts within your sample with our RNA-Seq services. Since the entire transcriptome is covered with short Illumina reads, RNA-Seq is the preferred method to analyse novel transcripts, novel isoforms, alternative splice sites, rare transcripts or fusion genes.


Your advantages:

  • Analyse gene expression, alternative splice sites or fusion genes
  • Strand-specific protocol (upon request)
  • Obtain comprehensive view of the entire transcriptome
  • Analyse prokaryotic transcripts by rRNA depletion

Selected publications about expression profiling services

2015

Expression Profiling (HiSeq) Kwasiborski, A. et al., Transcriptome of the quorum-sensing signal-degrading Rhodococcus erythropolis responds differentially to virulent and avirulent Pectobacterium atrosepticum. Heredity

 

2014

Expression profiling (HiSeq) Boenigk, J. et al., Effects of silver nitrate and silver nanoparticles on a planktonic community: general trends after short-term exposure. PloS one 9(4)

Expression profiling (3' fragment library): Amich et al. Regulation of sulphur assimilation is essential for virulence and affects iron homeostasis of the human-pathogenic mould Aspergillus fumigatus. PLOS One, 9(8)

De novo transcriptome analysis FLX & gene expression HiSeq: Shimizu et al. Qualitative de novo analysis of full length cDNA and quantitative analysis of gene expression for common marmoset (Callithrix jacchus) transcriptomes using parallel long-read technology and short-read sequencing. PLOS One, 9(6)

 

2013

Expression profiling: Gould et al. Deep sequencing of Trichomonas vaginalis during the early infection of vaginal epithelial cells and amoeboid transition. International Journal for Parasitology [Epub ahead of print]

 

2008

Expression profiling: Torres, T.T., Ottenwälder, B. et al. Gene expression profiling by massively parallel sequencing. Genome Research (2008) 18: 172-177


Bold = Eurofins employee